Cinnamon Roll Protein Muffins

Category: Rise and Shine with Delicious Breakfast Recipes

Experience the warmth and aroma of cinnamon swirled into tender, high-protein muffins. Made with almond flour, vanilla protein powder, and Greek yogurt, these muffins offer the classic cinnamon roll flavor in a nourishing, macro-balanced treat. A touch of maple syrup and a drizzle of glaze make them just sweet enough, while low refined sugar ensures lasting energy. Ideal for meal prep, breakfast, or healthy snacking, they store well for busy days and can be customized for vegan or gluten-free lifestyles.

Recipes Fives Halima
Created by Mary Loxip Mary Loxip
Last updated on Thu, 06 Nov 2025 22:00:45 GMT
A cinnamon roll muffin with a bite taken out of it. Pin
A cinnamon roll muffin with a bite taken out of it. | panbite.com

Cinnamon Roll Protein Muffins bring everything you love about cinnamon rolls into a portable high protein muffin that fits into busy mornings or snack breaks. There is the classic swirl of cinnamon and sweetness without the sugar overload, and your kitchen will smell absolutely incredible while they bake. These muffins fit right into meal prep routines and work well for anyone hoping to make more nutritious choices that actually taste good.

When I first created these I could hardly wait for them to cool before trying one. I ended up making a second batch that same week because my family finished them so quickly. These muffins have a way of disappearing fast, especially if you drizzle on a little glaze.

Gather Your Ingredients

  • Vanilla protein powder: Brings the protein boost and adds some sweetness. Use a brand with a taste you enjoy since it is a major ingredient.
  • Almond flour: Gives tender crumb and extra fiber. Look for finely ground flour for best texture.
  • Coconut flour: Soaks up moisture and ensures a soft crumb.
  • Greek yogurt: Adds moisture and keeps the muffins dense yet fluffy. Choose a thick unsweetened variety for control over sweetness.
  • Unsweetened almond milk: Helps hydrate the batter without adding more sugar. Try to use fresh almond milk for the best taste.
  • Eggs: Bind everything together and supply more protein.
  • Melted coconut oil: Adds richness and keeps them moist. Opt for unrefined if you want a pronounced coconut flavor.
  • Maple syrup: Provides natural sweetness and goes perfectly with cinnamon.
  • Vanilla extract: Ties all the flavors together. Real vanilla makes a difference.
  • Cinnamon: Is the star and gives these their classic warm flavor. Choose fresh ground Ceylon cinnamon if you can find it.
  • Baking soda: Activates with yogurt for a good rise. Make sure it is fresh for that lift.
  • Salt: Balances and boosts all the flavors.
  • Coconut sugar and cinnamon (for swirl): Bring texture and that signature look.
  • Sugar free powdered monk fruit sweetener, almond milk, and vanilla (for glaze): Create the drizzle. Use more almond milk if you want a thinner glaze.

How to Make It

Prep the Oven and Tin:
Preheat your oven to three hundred fifty degrees Fahrenheit (about one hundred seventy five Celsius) and line a muffin tin with ten paper liners so nothing sticks.
Mix the Dry Ingredients:
In a large mixing bowl add protein powder, almond flour, coconut flour, cinnamon, baking soda, and salt. Whisk thoroughly so everything is even and there are no lumps.
Combine the Wet Ingredients:
In a separate medium bowl crack the eggs and beat with a fork or whisk until frothy. Add Greek yogurt, maple syrup, almond milk, melted coconut oil, and vanilla extract. Stir until smooth and fully blended.
Make the Cinnamon Swirl:
Mix coconut sugar and cinnamon together in a small bowl, ensuring the blend is even. This will help create that classic swirl in every muffin.
Combine Wet and Dry Mixtures:
Pour the wet mixture into the bowl with the dry ingredients. Gently fold together until just combined. Do not overmix or the muffins can get dense.
Fill and Swirl the Muffins:
Spoon the batter evenly among the lined muffin wells. Fill each about three quarters full. Sprinkle a little of the cinnamon sugar mixture over each then use a toothpick or small knife to swirl it through the batter for that signature cinnamon roll look.
Bake to Perfection:
Bake in the preheated oven for thirty to forty five minutes. Start checking at thirty minutes. A toothpick inserted in the center should come out mostly clean. Allow the muffins to cool in the tin for five minutes before transferring to a wire rack.
Glaze and Enjoy:
To make the glaze stir together powdered monk fruit sweetener, almond milk, and vanilla extract. Drizzle over cooled muffins. Adjust milk for the thickness you prefer.
A close up of a cupcake with frosting.
A close up of a cupcake with frosting. | panbite.com

Cinnamon stands out here as my favorite, not just for taste, but because it reminds me of baking with my grandmother. She always swirled extra cinnamon through my snacks because she knew how much I loved its aroma. It gives the muffins a cozy feeling and makes your whole house smell inviting.

Flavor Boosters

Room temperature is best if you plan to eat the muffins within two days. Store in an airtight container to keep them soft and moist. For longer storage refrigerate for up to one week. They also freeze well. Simply wrap each muffin individually then place in an airtight bag. Thaw overnight or microwave for a quick warm up.

Serving Suggestions

I love pairing these muffins with a strong mug of coffee or a creamy oat milk latte. They also go well with a spoonful of almond or cashew butter for extra richness. You can even crumble one up over Greek yogurt with berries for a quick breakfast parfait. They are a kid friendly option that still feels like a grownup treat.

Creative Twists

In autumn swirl in some pumpkin puree and a sprinkle of nutmeg or cloves. In spring brighten with lemon zest and a pinch of cardamom. You can easily swap the cinnamon sugar swirl for a sprinkle of chopped nuts or dried fruit for extra interest.

A plate with three muffins on it.
A plate with three muffins on it. | panbite.com

The balance between protein, sweetness, and classic cinnamon flavor makes these muffins something you want to bake again and again. They were created during a cold snap when I wanted classic comfort food without the sugar crash, so now they are one of my top go to recipes all year.

Common Questions About This Recipe

→ Can I make these muffins gluten-free?

Yes, use certified gluten-free almond and coconut flours to keep these muffins suitable for gluten intolerance. Always check your specific product labels.

→ How do I ensure the muffins are moist and not dry?

Combining Greek yogurt, eggs, and almond milk keeps the muffins moist. Avoid overbaking, and check for doneness at the lower end of the time range.

→ What is the best way to store these muffins?

Store muffins in an airtight container at room temperature for 2–3 days or refrigerate up to a week. They freeze well in wrapped portions for longer keeping.

→ Is there a vegan alternative for this muffin?

For a vegan version, substitute plant-based protein powder, almond milk, and flax eggs for animal-based ingredients. The results will still be delicious and hearty.

→ How do you achieve the cinnamon swirl effect?

Mix coconut sugar and cinnamon, then layer or swirl it into your muffin batter right before baking for that signature cinnamon roll look and flavor.

Cinnamon Roll Protein Muffins

Soft, protein-packed cinnamon roll muffins with almond flour, Greek yogurt, and a hint of maple make great snacks or breakfast bites. Enjoy these fluffy, satisfying treats for spring meal prep or post-workout cravings. Save & click.

Preparation Time
30 minutes
Cooking Time
45 minutes
Complete Time
75 minutes
Created by Mary Loxip: Mary Loxip

Type of Recipe: Breakfast

Level of Skill: Some Experience Needed

Cultural Cuisine: American

Serves: 10 Portion Size (10 muffins)

Dietary Needs: Suitable for Vegetarians, Free From Gluten

What You Need

→ Dry Ingredients

01 1 cup vanilla protein powder
02 1 cup almond flour
03 1/4 cup coconut flour
04 1 1/2 teaspoons ground cinnamon
05 1/2 teaspoon baking soda
06 1/4 teaspoon salt

→ Wet Ingredients

07 2 large eggs
08 1/4 cup Greek yogurt
09 1/4 cup unsweetened almond milk
10 2 tablespoons melted coconut oil
11 1/4 cup pure maple syrup
12 1 teaspoon vanilla extract

→ Cinnamon Swirl

13 2 tablespoons coconut sugar
14 1 teaspoon ground cinnamon

→ Optional Glaze

15 2 tablespoons sugar-free powdered monk fruit sweetener
16 1 to 2 teaspoons unsweetened almond milk
17 1/4 teaspoon vanilla extract

How to Make It

Step 01

Preheat oven to 350°F. Line a standard muffin tin with 10 paper liners.

Step 02

In a large mixing bowl, whisk together vanilla protein powder, almond flour, coconut flour, ground cinnamon, baking soda, and salt until well combined.

Step 03

In a separate bowl, beat the eggs thoroughly. Stir in Greek yogurt, pure maple syrup, unsweetened almond milk, melted coconut oil, and vanilla extract until smooth.

Step 04

In a small bowl, blend coconut sugar and ground cinnamon for the swirl. Set aside.

Step 05

Add the wet mixture to the dry ingredients. Fold gently until just incorporated—do not overmix.

Step 06

Divide half of the batter evenly among the muffin liners. Sprinkle the prepared cinnamon swirl mixture over each portion.

Step 07

Top with remaining batter. Use a toothpick or knife to gently swirl the layers for a marbled effect.

Step 08

Bake in the center of the oven for 30 to 45 minutes, or until a toothpick inserted into the center comes out clean.

Step 09

Remove the tin from the oven and allow muffins to cool in the pan for 5 minutes. Transfer to a wire rack to cool completely before glazing.

Step 10

For the glaze, mix powdered monk fruit sweetener, unsweetened almond milk, and vanilla extract in a small bowl until smooth. Adjust almond milk for desired consistency.

Step 11

Drizzle glaze over cooled muffins if using. Serve and enjoy.

Extra Tips

  1. For meal prep, store muffins in an airtight container at room temperature for up to 3 days, refrigerate for up to 1 week, or freeze individually wrapped muffins and thaw as needed.
  2. Cinnamon provides antioxidants and warming flavor. Adjust sweetness according to preference by modifying maple syrup or sweetener quantities.
  3. To make vegan, substitute plant-based protein powder, use non-dairy yogurt, increase almond milk if needed for consistency, and replace eggs with flax eggs (1 tablespoon ground flaxseed mixed with 2.5 tablespoons water per egg).
  4. Certified gluten-free oats or a blend of almond and coconut flours keep this suitable for gluten-intolerant individuals.

Tools You'll Need

  • Muffin tin
  • Mixing bowls
  • Wire whisk
  • Spatula
  • Toothpick or knife
  • Measuring cups and spoons
  • Wire rack

Allergen Information

Always review ingredients for possible allergens and consult a healthcare provider if unsure.
  • Contains tree nuts (almond flour, coconut flour, coconut oil, almond milk)
  • Contains eggs and dairy (Greek yogurt)

Nutritional Details (Per Serving)

These facts are provided as informational and aren't a substitute for professional advice.
  • Calories: 430
  • Fat Content: 18 grams
  • Carbohydrate Content: 40 grams
  • Protein Content: 15 grams